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UBC
Makers of X-ray Diffraction Equipment for
Macromolecular Crystallography
Crystallography Organizations
Databases
Crystallography Basics
Crystallization
Space Group Information
Molecular Replacement
Program Suites
CBA Crystallographic software (UNIX)
O
Refinement
Protein Structure Basics
Molecular Surface Analysis
MolSurfer :2-D maps of protein interfaces, useful for exploring protein complexes and their interactions.
ACCESS :F.M. Richard's Solvent Accessible Surface Area program
MS :Molecular Surface Package
GRASP : Barry Honig's group
OS : Occluded Surface
APROPOS :Calculate pockets on the surface of a molecule
surfaces : This article reviews computations and visualizations of molecular surfaces
Pat Fleming : has a very nice lecture on molecular surface analysis, Wrote the program OS
Figure Preparation
Viewing Molecules
Macromolecular 3D Structures
ReLiBase : a database system for analysing receptor/ligand complexes deposited in the Protein Data Bank
Micromolecular 3D Structures
PROMISE : The Prosthetic groups and Metal Ions in Protein Active Sites Database Version 2.0
The IMB Jena Image Library Hetero Components Database : This database provides information on hetero components included in three-dimensional biopolymer structures deposited at the Protein Data Bank (PDB)
IUPAC :Recommendations on Organic & Biochemical Nomenclature, Symbols & Terminology etc.
LPC & CSU :Ligand-Protein Contacts & Contacts of Structural Units
3DPSD : 3D structures of drugs
acdlabs : molecule drawing program etc
MDL : ISIS draw, data bases etc
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